INTRODUCTION
Table 1
Trait | Race |
Age (mean, y) |
Marker | Alleles | Genomic location | Physical location (kb) | SNP type | QTL interval (kb) | Genes | Reference |
---|---|---|---|---|---|---|---|---|---|---|
LVM | Caucasian(n = 906) | 60.5 | rs409045 | C/T | 5p13.2 | 34,628 | Intergenic | 34,428–34,828 | RA114 | [72] |
rs1833534 | C/G/T | 5q11.2 | 163,393 | Intergenic | 163,193–163,593 | CCNG1, NUDCD2, HMMR, MAT2B | ||||
rs4129000 | C/T | 12q14.3 | 65,559 | Intronic | 65,359–65,759 | LOC729298, MSRB3, RPSAP52 | ||||
rs4129218 | G/A | 12q14.3 | 65,564 | Intronic | 65,364–65,764 | LOC729298, MSRB3, RPSAP52 | ||||
rs1155635 | A/C/G | 13q21.33 | 70,373 | Intergenic | 70,173–70,573 | KLHL1 | ||||
African Americans(n = 1,467) | 50.8 | rs238688 | G/A | 20p13 | 3,544 | Intronic | 3,344–3,744 | ATRN, ADAM33, C20orf194, GFRA4, HSPA12B, SIGLEC1 | ||
rs756529 | G/A | 20q13.13 | 49,394 | Intronic | 49,194–49,594 | KCNB1, DOX27, PTGIS, ZFAS1, ZNFX1 | ||||
NS (Dominicans)(n = 1,360) | 46.1 | D12S1042 | G/T | 12p11.23 | 27,539 | Intronic | 27,338–27,738 | SMCO2*, AARNTL2, PPFIBP1, MRPS35 | [74] | |
NS (n = 12,612) | 62.0 | rs17568359 | G/C | 14q12 | 26,168 | Intergenic | 25,968–26,368 | NOVA1 | [21] | |
rs7565161 | A/G | 2p21 | 47,267 | Intronic | 47,067–47,467 | CALM2, EPCAM-DT*, BCYRN1, C2orf61, EPCAM, MSH2, STPG4, TTC7A | ||||
rs8031633 | T/C | 15q14 | 37,247 | Intergenic | 37,047–37,447 | MEIS2 | ||||
African Americans (n = 1,258) | 45.3 | rs7774046 | T/C | 6p21.2 | 39,334 | Exonic | 39,134–39,534 | KCNK5, KCNK17, KCNK16, KIF6 | [14] | |
rs7205297 | G/A | 16q22.2 | 71,991 | Intronic | 71,791–72,191 | AP1G1, DHODH, DHX38, HP, HPR, KIAA0174, PKD1L3, PMFBP1, TXNL4B, ATXN1L, ZNF821, IST1, PKD1L3, HP | ||||
Caucasian(n = 851) | 43.0 | rs1320448 | A/G | 10q25.1 | 104,086 | Intergenic | 103,886–104,286 | COL17A1, CFAP43, GSTO1, GSTO2, SFR1, SLK, STN1 | [75] | |
rs12757165 | A/G | 1q41 | 216,543 | Intronic | 216,334–216,743 | ESRRG, USH2A | ||||
rs16830359 | G/A/T | 1p34.2 | 43,130 | Intergenic | 42,930–43,330 | SLC2A1, C1orf210, CFAP57, EBNA1BP2, FAM183A, TIE1, TMEM125 | ||||
rs10947055 | T/C | 6p22.1 | 30,125 | Intergenic | 29,915–30,315 | TRIM38, HCG17, HCG18, HCG4B, HCG9, HLA-A, HLA-J, HLA-L PPP1R11, RNF39, TRIM15, TRIM31, TRIM40, TRIM10, TRIM15, TRIM26, ZNRD1, ZNRD1ASP | ||||
rs1916521 | C/T | 10q21.1 | 55,657 | Intergenic | 55,267–55,857 | ZWINT | ||||
rs1484170 | T/C | 10q23.1 | 80,939 | Intergenic | 80,739–81,139 | NRG3 | ||||
rs6995588 | C/T | 8q12.1 | 60,091 | Intergenic | 59,891–60,291 | CA8 | ||||
rs4520040 | G/A | 6q16.3 | 103,984 | Intergenic | 103,784–104,184 | GRIK2 | ||||
rs769554 | C/T | 3q13.13 | 109,485 | Intergenic | 109,285–109,685 | DPPA4, DPPA2, LINC01205 | ||||
rs4236016 | C/G/T | 6p22.3 | 22,246 | Intergenic | 22,046–22,446 | SOX4, CASC15, PRL, NBAT1 | ||||
rs17636733 | T/C | 15q12 | 25,667 | Intergenic | 25,467–25,867 | UBE3A, ATP10A, LINC02250 | ||||
rs1575891 | T/A/C | 13q14.2 | 47,624 | Intergenic | 47,424–47,824 | HTR2A | ||||
African Americans(n = 6,765) | 51.3 | rs4552931 | A/G | 8q11.21 | 48,258 | Intergenic | 48,058–48,458 | UBE2V2 | [19] | |
NS (n = 44,203) | 62.7 | rs1454157 | C/T | 4q34.2 | 176,437 | Intergenic | 176,237–176,637 | SPCS3, ASB5 | [18] | |
NS (Dominicans)(n = 180) | 46.2 | rs1046116 | G/A | 12p11.21 | 32,868 | Exonic | 32,668–33,068 | PKP2, DNM1L | [20] | |
rs1035607 | A/C/T | 12p11.22 | 29,356 | Intronic | 29,156–29,556 | ERGIC2, FAR2, OVCHI-AS1, TMTC1 | ||||
rs11168459 | G/A | 12q13.11 | 48,202 | Exonic | 48,002–48,402 | OR10AD1, ASK8, CCDC184, COL2A1, H1FNT, PFKM, SENP1, ZNF641 | ||||
rs2191162 | A/G | 12q13.11 | 46,803 | Intronic | 46,663–47,003 | SLC38A4 | ||||
rs731236 | G/A | 12q13.11 | 47,844 | Exonic | 47,644–48,044 | VDR, COL2A1, ENDOU, HDAC7, RAPGEF3, RPAP3, SENP, SLC48A1, TMEM106C | ||||
rs74081827 | A/G | 12q12 | 45,439 | Exonic | 45,239–45,639 | ANO6 | ||||
rs35989439 | T/A | 12p11.21 | 30,992 | Exonic | 30,792–31,192 | TSPAN11, DDX11, DDX11-AS1 | ||||
rs11168985 | A/C | 12q12 | 38,652 | Intergenic | 38,452–38,852 | CPNE8 | ||||
rs7311790 | A/G | 12q13.11 | 47,667 | Intronic | 47,467–47,867 | RPAP3, ENDOU, RAPGEF3, HDAC7, VDR | ||||
NS (European)(n = 16,920) | 62.5 | rs2255167 | T/A | 2q31.2 | 178,693 | Intronic | 178,493–178,893 | TTN, CCDC141, TTN-AS1 | [15] | |
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LVDD | NS (n = 16,706) | 61.0 | rs89107 | A/G | 6q22.31 | 118,256 | Intronic | 118,056–118,456 | SLC35F1 | [21] |
rs11153768 | C/T | 6q22.31 | 118,666 | Intronic | 118,466–118,866 | CEP85L, BRD7P3, MCM9, PLN, SELENOKP3 | ||||
African Americans(n = 5,555) | 51.3 | rs2700294 | G/A/C | 7p15.3 | 21,318 | Intergenic | 21,118–21,518 | DNAH11, SP4 | [19] | |
rs7213314 | C/T | 17q24.2 | 68,689 | Intergenic | 68,489–68,889 | ABCA8, FAM20A, PRKAR1A, WIPI1, LINC01482 | ||||
NS (n = 44,203) | 62.7 | rs11153730 | C/T | 6q22.31 | 118,346 | Intergenic | 118,146–118,546 | SLC35F1, BRD7P3, CEP85L | [18] | |
rs12541595 | G/T | 8q24.13 | 124,844 | Intergenic | 124,644–125,044 | MTSS1, SQLE, WASHC5, ZNF572 | ||||
rs10774625 | A/G | 12q24.12 | 111,472 | Intronic | 111,272–111,672 | ATXN2, BRAP, CUX2, FAM109A, PHETA1, SH2B3 | ||||
East Asian(n = 19,676) | 66.7 | rs34866937 | G/A | 8q24.13 | 124,847 | Intergenic | 124,647–125,047 | MIR4662B, LINC00964, MTSS1, SQLE, WASHC5, ZNF572 | [16] | |
rs3812625 | A/G | 10q22.2 | 73,997 | Intergenic | 73,797–74,197 | VCL, ADK, AP3M1, C10orf55, CAMK2G, NDST2, PLAU, ZSWIM8 | ||||
rs11874741 | G/A | 18q12.1 | 32,497 | Intergenic | 32,297–32,697 | GAREM1, WBP11P1, KLHL14 | ||||
LVWT | Caucasian and African Americans (n = 3,611) | 51.7 | rs1436109 | G/T | 11q23.2 | 113,120 | Intronic | 112,920–113,320 | NCAM1, TTC12 | [14] |
NS (n = 16,706) | 61.5 | rs7910620 | C/G/T | 10q23.1 | 86,087 | Intronic | 85,887–86,287 | GRID1 | [21] | |
rs2059238 | A/C/T | 16q23.1 | 78,224 | Intronic | 78,024–78,424 | WWOX, CLEC3A | ||||
rs17132261 | C/T | 5q21.1 | 110,672 | Intronic | 110,472–110,872 | TMEM232*, SLC25A46 | ||||
IVWT | African Americans(n = 1,258) | 45.3 | rs16855517 | G/A | 2q24.3 | 168,571 | Intronic | 168,371–168,771 | CERS6*, LASS6 | [14] |
rs7836010 | G/C | 8q24.11 | 117,849 | Intronic | 117,649–118,049 | EXT1 | ||||
African Americans(n = 5,555) | 51.3 | rs1571099 | C/T | 10q26.12 | 120,507 | Intronic | 120,307–120,707 | PLPP4, RPL21 | [19] | |
LVEDV | NS (European)(n = 16,920) | 62.5 | rs2042995 | T/C | 2q31.2 | 178,694 | Exonic | 178,494–178–894 | KCNMB2*, TTN | [15] |
rs7071853 | T/C | 10q26.11 | 119,552 | Intergenic | 119,352–119,752 | RGS10*, BAG3, TIAL1, INPP5F | ||||
rs7310615 | C/G | 12q24.12 | 111,427 | Intronic | 111,227–111,627 | ATXN2*, SH2B3, PHETA1 | ||||
LVESV | NS (European)(n = 16,920) | 62.5 | rs2042995 | T/C | 2q31.2 | 178,694 | Exonic | 178,494–178,894 | TTN, CCDC141 | [15] |
rs200712209 | A/T | 8q24.13 | 124,846 | Intronic | 124,646–125,046 | MTSS1, ZNF572, SQLE, WASHC5 | ||||
rs72840788 | G/A | 10q26.11 | 119,656 | Intronic | 119,456–119,856 | BAG3, TIAL1, RGS10, INPP5F, MCMBP, GRK5 |
Each significant locus was re-evaluated by the authors using the latest version of UCSC Genome Browser (Human GRCh38/hg38). QTL interval was set at ±200 kb centered around each SNP and genes in the QTL interval were identified using the UCSC Genome Browser. The significant level for linkages or associations varies by studies and if not specified, a significant p-value of 1.00E-5 was used. LVM, left ventricular mass; LVDD, left ventricular diastolic dimension; LVWT, left ventricular wall thickness; IVWT, inter-ventricular septal wall thickness; LVEDV, LVED volume; LVESV, LVES volume; NS, non-specified. Bold font indicates genes reported in previous studies as the nearest genes. Plain text genes with no symbol are additionally identified in the QTL interval. *Genes newly identified as the nearest gene in the QTL interval.
Table 2
Trait | Race |
Age (mean, y) |
Marker | Allele | Genomic location | Physical location (kb) | SNP type | QTL interval (kb) | Genes | Reference |
---|---|---|---|---|---|---|---|---|---|---|
SV | Caucasian(n = 475) | 39.1 | D14S53 | - | 14q31.1 | 76,922 | - | 76,722–77,122 | ANGEL1, CIPC, IRF2BPL, LINC01629, LINC02288, LINC02289, LRRC74A, VASH1, VASH1-AS1 | [77] |
CO | African American(n = 272) | 37.9 | D18S866 | - | 18q11.2 | 21,624 | Intronic | 21,424–21,824 | ABHD3, ESCO1, GREB1L, MIB1, SNRPD1 | |
EF | African Americans(n = 6,765) | 51.3 | rs9530176 | T/A | 13q22.1 | 73,244 | Intergenic | 73,044–73,444 | KLF5, PIBF1 | [19] |
rs16991189 | T/C/G | 20p12.3 | 5,717 | Intergenic | 5,517–5,917 | C20orf196, CHGB, SHLD1*, CHGB, GPCPD1 | ||||
rs2404490 | C/A/T | 20p11.21 | 22,718 | Intergenic | 22,518–22,918 | FOXA2, LINC01747*, LINC00261 | ||||
East Asian(n = 19.676) | 66.7 | rs6546120 | G/A/T | 2p14 | 65,011 | Intronic | 64,811–65,211 | SLC1A4, CEP68, LINC01800, LINC02245, RAB1A | [16] | |
rs34866937 | G/A | 8q24.13 | 124,847 | Intergenic | 124,647–125,047 | MIR4662B, LINC00964, MTSS1, SQLE, WASHC5, ZNF572 | ||||
rs5760061 | G/A | 22q11.23 | 23,835 | Exonic | 23,635–24,035 | DERL3, C22orf15, CABIN1, CHCD10, DDT, DDTL, GSTT2, GSTT4, GSTT2B, MIF, MIF-AS1, RGL4, SLC211, SMARCB1, VPREB3, ZNF70 | ||||
NS (European)(n = 16,920) | 62.5 | rs945425 | T/A/C | 1p36.13 | 16,021 | Intergenic | 15,821–16,221 | CLCNKA, ARHGEF19, CLCNKB, EPHA2, FAM131C, HSPB7, SPEN, ZBTB17 | [15] | |
rs2042995 | T/C | 2q31.2 | 178,693 | Exonic | 178,493–178,893 | TTN, CCDC141, TTN-AS1 | ||||
rs34866937 | G/A | 8q24.13 | 124,847 | Intergenic | 124,647–125,047 | MTSS1, LINC00964*, MIR4662B, SQLE, WASHC5, ZNF572 | ||||
rs72840788 | G/A | 10q26.11 | 119,655 | Intronic | 119,455–119,855 | BAG3, GRK5, INPPF5F, MCMBP, TIAL1 | ||||
FS | NS (n = 44,203) | 62.7 | rs9470361 | G/A/T | 6p21.2 | 36,655 | Intergenic | 36,455–36,855 | CDKN1A, DINOL*, CPNE5, KCTD20, SRSF3PPIL, STK38 | [18] |
East Asian(n = 19,676) | 66.7 | rs6546120 | G/A/T | 2p14 | 65,011 | Intronic | 64,811–65,211 | SLC1A4, CEP68, LINC01800, LINC02245, RAB1A | [16] | |
rs34866937 | G/A | 8q24.13 | 124,847 | Intergenic | 124,647–125,047 | MIR4662B, LINC00964, MTSS1, SQLE, WASHC5, ZNF572 | ||||
rs11025521 | T/G | 11p15.1 | 20,348 | Intergenic | 20,138–20,548 | DBX1, HTATIP2, PRMT3 | ||||
rs5760054 | C/T | 22q11.23 | 23,819 | Intronic | 23,619–24,019 | SMARCB1, C22orf15, CABIN1, CHCHD10, DDT, DDTL, DERL3, DRICH1, GSTT2, GSTT4, GUSBP11, MIF, MIF-AS1, RGL4, SLC2A11 |
Each significant locus was re-evaluated by the authors using the latest version of UCSC Genome Browser (Human GRCh38/hg38). QTL interval was set at ±200 kb centered around each SNP. Genes in the QTL interval were identified using the UCSC Genome Browser. The significant level for linkages or associations varies by studies and if not specified, a significant p-value of 1.00E-5 was used. SV, stroke volume measured during exercising at 50W; CO, cardiac output measured during exercising at 50W; EF, ejection fraction; FS, fractional shortening; NS, non-specified. Bold font indicates genes reported in previous studies as the nearest genes. Plain text genes with no symbol are additionally identified in the QTL interval. *Genes newly identified as the nearest gene in the QTL interval.
Table 3
Trait | Race | Age (mean, y) | Marker | Allele | Genomic location | Physical location (kb) | SNP type | QTL interval (kb) | Genes | Reference |
---|---|---|---|---|---|---|---|---|---|---|
ΔSV | Caucasian(n = 475) | 39.1 | D10S1666 | - | 10p11.2 | 33,692 | Intergenic | 33,492–33,892 | LINC00838, RPL23P11 | [77] |
Caucasian and African American(n = 701) | 38.5 | D2S324 | - | 2q31.2 | 179,656 | Intronic | 179,456–180,056 | TTN, ZNF365B | [86] | |
D2S385 | - | 2q31.2 | 179,625 | Intronic | 179,425–180,025 | |||||
D2S148 | - | 2q31.2 | 178,231 | Intronic | 178,031–178,431 | CHROMR, OSBPL6, PDE11A, PRKRA, RBM45 | ||||
Caucasian(n = 450) | 39.1 | rs398686 | C/T | 10p11.22 | 32,032 | Intronic | 31,832–32,232 | KIF5B, ARHGAP12 | [85] | |
rs172431 | G/A | 10p11.22 | 32,037 | Intronic | 31,837–32,237 | |||||
rs211286 | G/A | 10p11.22 | 32,046 | Intronic | 31,846–32,246 | |||||
rs211302 | C/G | 10p11.22 | 32,056 | Intergenic | 31,856–32,226 | |||||
ΔCO | Caucasian and African American(n = 701) | 38.5 | D2S148 | - | 2q31.2 | 178,231 | Intronic | 178,031–178,431 | CHROMR, OSBPL6, PDE11A, PRKRA, RBM45 | [86] |
Each significant locus was re-evaluated by the authors using the latest version of UCSC Genome Browser (Human GRCh38/hg38). QTL interval was set at ±200 kb centered around each SNP and genes in the QTL interval were identified using the UCSC Genome Browser. ΔSV, changes in stroke volume by exercise training; ΔCO, changes in cardiac output by exercise training. Bold font indicates genes reported in previous studies as the nearest genes. Plain text genes are additionally identified in the QTL interval.

GENETIC REGULATION OF CARDIAC STRUCTURE AND FUNCTION
Twin studies
Family studies
Linkage/association studies

GENETIC REGULATION OF CARDIAC RESPONSES TO EXERCISE TRAINING
Twin studies
Family studies
Linkage/association studies

CONCLUSION
