Journal List > J Bacteriol Virol > v.43(4) > 1034098

Dang, Kim, Park, Shin, Park, and Kim: Analysis of Oropharyngeal Microbiota between the Patients with Bronchial Asthma and the Non-Asthmatic Persons

Abstract

Bronchial asthma can be triggered by microbial agents in the oropharynx. This study was designed to identify the differences in microbiota of oropharynx of bronchial asthmatic patients in contrast to normal controls. In order to resolve the qualitative and quantitative diversity of the 16S rRNA gene present in the oropharynx microbiota of 4 patients and 4 controls, we compared microbial communities using Sanger sequencing and 376 sequences of 16S rRNA gene were analyzed. Of the total microbial diversity detected in the oropharynx in asthmatic patients 45.6% comprised members of the Firmicutes. In contrast, Proteobacteria (44.0%) dominated the oropharyngeal microbiota in the normal control group. Members of the Bacteroidetes, Fusobacteria, Actinobacteria, TM7, Cyanobacteria and unclassified bacteria were present in both groups. In conclusion, the difference in the microbiota of the oropharynx between patients and normal individuals could trigger symptomatic attacks in bronchial asthma.

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Figure 1.
Comparison of the microbial diversity in the oropharynx bronchial asthma and non-asthmatic persons.
jbv-43-270f1.tif
Figure 2.
Relative abundance of the main phyla identified in bronchial asthma and non-asthmatic persons. The comparison of the proportion of each phylum among the oropharyngeal microbiota of the asthmatic versus non-asthmatic persons.
jbv-43-270f2.tif
Figure 3.
UniFrac analysis of V1-V3 16S rRNA gene sequences of the microbial community of oropharynx from in bronchial asthma and non-asthmatic persons. (A) A jackknifed clustering of the environments in the UniFrac dataset. The numbers next to the nodes represent the number of times that particular node was observed in a random sampling from the whole dataset. (B) Principal Component Analysis scatter plot of individuals from micorobiota in bronchial asthma and non-asthmatic persons (non-asthmatic persons, red; bronchial asthma, blue).
jbv-43-270f3.tif
Table 1.
Characteristic of study participants
Sample no. Sex Spirometry Respiratory manifestation Smoking
A1 Male *FVC/FEV1 72 Cough, wheezing No
A2 Female *FVC/FEV1 86 Noctonal dyspnea No
A3 Female *FVC/FEV1 63 Wheezing, DOE No
A4 Female *FVC/FEV1 62 Dyspnea, wheezing No
N1 Female No symptom No
N2 Male No symptom No
N3 Male No symptom No
N4 Male No symptom No

* FVC, Forced vital capacity; FEV, Forced expiratory volume.

Table 2.
Statistics analysis between the bronchial asthma and non-asthmatic persons
Phylum Genus Average (%)
Estimate Standard Error Chi-square P-value
Asthma Normal
Firmicutes Streptococcus spp. 29.5 9.3 1.5626 0.2801 31.12 <.0001
Bacteroidetes Prevotella spp. 22.4 7.8
Firmicutes Veillonella spp. 13.7 5.2
Fusobacteria Leptotrichia spp. 7.7 3.6
Proteobacteria Neisseria spp. 6 23.3 -0.8193 0.3428 5.71 0.0168
Actinobacteria Actinomyces spp. 3.8 3.1
Actinobacteria Rothia spp. 2.7 4.2 -0.9276 0.7105 1.7 0.1917
Proteobacteria Haemophilus spp. 2.2 9.3 -1.0978 0.5758 3.63 0.0566
Firmicutes Oribacterium spp. 1.6 1
Fusobacteria Fusobacterium spp. 1.1 3.6 -0.5628 0.8079 0.49 0.486
Proteobacteria Pseudomonas spp. 1.1 3.1 -0.4131 0.8235 0.25 0.6159
Proteobacteria Alcaligenes spp. 1.1 1.6 -0.08 0.9787 0.01 0.9349
Bacteroidetes Hallella spp. 1.1 1.6 0.3347 0.9153 0.13 0.7146
TM7 unclassified genus 1.1 1.6 0.2567 0.925 0.08 0.7814
Bacteroidetes Porphyromonas spp. 0.6 1 0.0454 1.2281 0 0.9705
Firmicutes Anaerosporobacter spp. 0.6 0.5 0.7422 1.4176 0.27 0.6006
Proteobacteria Bergeriella spp. 0.6 0
Firmicutes Megasphaera spp. 0.6 0
Bacteroidetes Paraprevotella spp. 0.6 0
Actinobacteria Phycicola spp. 0.6 0
Firmicutes Pilibacter spp. 0.6 0
Fusobacteria Streptobacillus spp. 0.6 0
Firmicutes Granulicatella spp. 0 3.6
Proteobacteria Campylobacter spp. 0 2.6
Bacteroidetes Capnocytophaga spp. 0 2.6
Bacteroidetes Xylanibacter spp. 0 2.6
Proteobacteria Sphingomonas spp. 0 1.6
Proteobacteria Phocoenobacter spp. 0 1
Proteobacteria Schlegelella spp. 0 1
Actinobacteria Atopobium spp. 0 0.5
Firmicutes Catonella spp. 0 0.5
Firmicutes Dialister spp. 0 0.5
Proteobacteria Enterobacter spp. 0 0.5
Firmicutes Gemella spp. 0 0.5
Bacteroidetes Kaistella spp. 0 0.5
Proteobacteria Microvirgula spp. 0 0.5
Proteobacteria Novosphingobium spp. 0 0.5
Proteobacteria Oscillibacter spp. 0 0.5
Firmicutes Parvimonas spp. 0 0.5
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