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<article xml:lang="EN" article-type="case-report">

<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">J Korean Med Sci</journal-id>
<journal-id journal-id-type="publisher-id">JKMS</journal-id>
<journal-title>Journal of Korean Medical Science</journal-title>
<issn pub-type="ppub">1011-8934</issn>
<issn pub-type="epub">1598-6357</issn>
<publisher>
<publisher-name>The Korean Academy of Medical Sciences</publisher-name>
</publisher>
</journal-meta>

<article-meta>

<article-id pub-id-type="doi">10.3346/jkms.2010.25.11.1665</article-id>

<article-categories>
<subj-group>
<subject>Case Report</subject>
<subj-group>
<subject>Infectious Diseases, Microbiology &#x0026; Parasitology</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>The First Case of Catheter-related Bloodstream Infection Caused by <italic>Nocardia farcinica</italic></article-title>
</title-group>

<contrib-group>

<contrib contrib-type="author">
<name>
<surname>Heo</surname>
<given-names>Sang Taek</given-names>
</name>
<xref ref-type="aff" rid="A1">1</xref>
<xref ref-type="fn" rid="FN1">&#x002A;</xref>
</contrib>

<contrib contrib-type="author">
<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0002-0978-1937</contrib-id>
<name>
<surname>Ko</surname>
<given-names>Kwan Soo</given-names>
</name>
<xref ref-type="aff" rid="A2">2</xref>
<xref ref-type="aff" rid="A3">3</xref>
<xref ref-type="fn" rid="FN1">&#x002A;</xref>
</contrib>

<contrib contrib-type="author">
<name>
<surname>Kwon</surname>
<given-names>Ki Tae</given-names>
</name>
<xref ref-type="aff" rid="A4">4</xref>
</contrib>

<contrib contrib-type="author">
<name>
<surname>Ryu</surname>
<given-names>Seong Yeol</given-names>
</name>
<xref ref-type="aff" rid="A5">5</xref>
</contrib>

<contrib contrib-type="author">
<name>
<surname>Bae</surname>
<given-names>In Gyu</given-names>
</name>
<xref ref-type="aff" rid="A6">6</xref>
</contrib>

<contrib contrib-type="author">
<name>
<surname>Oh</surname>
<given-names>Won Sup</given-names>
</name>
<xref ref-type="aff" rid="A7">7</xref>
</contrib>

<contrib contrib-type="author">
<name>
<surname>Song</surname>
<given-names>Jae-Hoon</given-names>
</name>
<xref ref-type="aff" rid="A3">3</xref>
<xref ref-type="aff" rid="A8">8</xref>
</contrib>

<contrib contrib-type="author">
<name>
<surname>Peck</surname>
<given-names>Kyong Ran</given-names>
</name>
<xref ref-type="aff" rid="A8">8</xref>
</contrib>

</contrib-group>

<aff id="A1"><label>1</label>Department of Internal Medicine, Jeju National University Hospital, Jeju, Korea.</aff>
<aff id="A2"><label>2</label>Department of Molecular Cell Biology, Sungkyunkwan University School of Medicine, Suwon, Korea.</aff>
<aff id="A3"><label>3</label>Asia Pacific Foundation for Infectious Diseases (ARFID), Seoul, Korea.</aff>
<aff id="A4"><label>4</label>Department of Internal Medicine, Daegu Fatima Hospital, Daegu, Korea.</aff>
<aff id="A5"><label>5</label>Department of Internal Medicine, Dongsan Medical Center, Keimyung University School of Medicine, Daegu, Korea.</aff>
<aff id="A6"><label>6</label>Department of Internal Medicine, Gyeongsang Institute of Health Sciences, Gyeongsang National University School of Medicine, Jinju, Korea.</aff>
<aff id="A7"><label>7</label>Department of Internal Medicine, Kangwon National University College of Medicine, Chuncheon, Korea.</aff>
<aff id="A8"><label>8</label>Department of Internal Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea.</aff>

<author-notes>
<corresp>
Address for Correspondence: Kyong Ran Peck, M.D. Division of Infectious Diseases, Samsung Medical Center, Sungkyunkwan University School of Medicine, 81 Irwon-ro, Gangnam-gu, Seoul 135-710, Korea. Tel: +82.2-3410-0329, Fax: +82.2-3410-0041, <email>krpeck@skku.edu</email>
</corresp>

<fn id="FN1" fn-type="equal">
 <p><sup>&#x002A;</sup>Sang Taek Heo and Kwan Soo Ko contributed equally to this work.</p>
</fn>
</author-notes>

<pub-date pub-type="ppub">
<month>11</month>
<year>2010</year>
</pub-date>
<pub-date pub-type="epub">
<day>26</day>
<month>10</month>
<year>2010</year>
</pub-date>
<volume>25</volume>
<issue>11</issue>
<fpage>1665</fpage>
<lpage>1668</lpage>
<history>
<date date-type="received">
<day>29</day>
<month>12</month>
<year>2009</year>
</date>
<date date-type="accepted">
<day>09</day>
<month>03</month>
<year>2010</year>
</date>
</history>
<permissions>
<copyright-statement>&#x00A9; 2010 The Korean Academy of Medical Sciences.</copyright-statement>
<copyright-year>2010</copyright-year>
<license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by-nc/3.0">
<p>This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (<ext-link ext-link-type="uri" xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="http://creativecommons.org/licenses/by-nc/3.0">http://creativecommons.org/licenses/by-nc/3.0</ext-link>) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.</p>
</license>
</permissions>

<abstract>
<p><italic>Nocardia farcinica</italic> is an emerging pathogen in immunocompromised hosts. Even though several species of <italic>Nocardia</italic> have been reported as causative pathogens of catheter-related blood stream infections (CRBSI), CRBSI caused by <italic>N. farcinica</italic> has not been reported. A 70-yr-old man with a tunneled central venous catheter (CVC) for home parenteral nutrition was admitted with fever for two days. <italic>Norcardia</italic> species was isolated from the blood through CVC and peripheral bloods and identified to <italic>N. farcinica</italic> by 16S rRNA and <italic>rpoB</italic> gene sequence analyses. This report emphasizes the rapid and correct identification of causative agents in infectious diseases in the selection of antimicrobial agents and the consideration of catheter removal.</p>
</abstract>

<kwd-group>
<kwd><italic>Nocardia farcinica</italic></kwd>
<kwd>Catheter-related Blood Stream Infection (CRBSI)</kwd>
<kwd><italic>rpoB</italic></kwd>
</kwd-group>

</article-meta>
</front>

<body>

<sec sec-type="intro">
<title>INTRODUCTION</title>
  <p>More than 70 taxonomical species have been recognized in the genus Nocardia. Of these, <italic>N. asteroides</italic>, <italic>N. nova</italic>, <italic>N. cavie</italic>, <italic>N. farcinica</italic>, <italic>N. brasiliensis</italic>, <italic>N. pseudobrasiliensis</italic>, <italic>N. otitidiscaviarum</italic> and <italic>N. transvalensis</italic> are known to cause infections in human. Predisposing conditions of Nocardia infection include solid tumors, hematologic malignancies, treatment with corticosteroids, bone marrow or solid organ transplantation, chronic pulmonary or renal diseases and acquired immunodeficiency syndrome (<xref ref-type="bibr" rid="B1">1</xref>).</p>

  <p><italic>Nocardia farcinica</italic> has been increasingly recognized as a causative microorganism of human infections (<xref ref-type="bibr" rid="B2">2</xref>). Unlikely other Nocardia spp., <italic>N. farcinica</italic> is characteristically resistant to multiple antimicrobial agents, including third-generation cephalosporins (<xref ref-type="bibr" rid="B3">3</xref>). Consequently, a patient who is infected by <italic>N. farcinica</italic> faces difficulty in treatment and the outcome is often death. Fortunately, <italic>N. farcinica</italic> rarely causes serious infections in immunocompetent hosts (<xref ref-type="bibr" rid="B1">1</xref>). Catheter-related bloodstream infection (CRBSI) caused by <italic>N. farcinica</italic> has not been reported to date. In this paper, we report the first case of CRBSI caused by <italic>N. farcinica</italic>, which was identified using 16S rRNA and <italic>rpoB</italic> gene sequences.</p>
</sec>

<sec sec-type="cases">
<title>CASE REPORT</title>
  <p>A 70-yr-old man with a two days history of fever was admitted to the Samsung Medical Center (SMC) in March 2005. The patient had been treated for atrial fibrillation and hypertension for the past several years. Two months previously, the patient had undergone an ileojejunal resection and right-sided hemicolectomy because of acute mesenteric infarction. Thereafter, the patient had been receiving home parenteral nutrition via a tunneled central venous catheter (CVC; Hickman catheter). The patient had no history of travel or contact with animals. Physical examination revealed a body temperature of 38.8&#x2103;. The right subclavian tunneled CVC displayed erythema and minimal purulent discharge at the exit site. Laboratory data including complete blood counts and blood chemistry were within normal limits and a chest radiograph was unremarkable. Three sets of blood samples for culture were drawn through the CVC (two sets) and a peripheral vein (one set). The patient was empirically treated with cefazolin (1 g every 8 hr intravenously). Later, ciprofloxacin (200 mg every 12 hr intravenously) was added to cover gram-negative rods. On day 5 of hospitalization, all the blood cultures yielded gram-positive rods. The bacteria grew at least 2 hr earlier in blood obtained from the CVC than blood obtained from the vein. By day 8, the bacteria had been identified as <italic>Nocardia</italic> species as described below. Cefazolin and ciprofloxacin were empirically substituted by parenteral trimethoprim-sulfamethoxazole (TMP-SMX, 15 mg/kg/day of trimethoprim) empirically after the identification of <italic>Nocardia</italic> spp. The CVC was removed because of persistent fever. Thereafter, the patient became afebrile and repeated blood cultures were negative. On day 17, the patient was switched from parenteral to oral TMPSMX. Oral TMP-SMX was continued for 6 weeks. At a 3-month follow-up after discontinuation of TMP-SMX, the patient was well with no evidence of recurrence.</p>

  <p>In vitro susceptibility testing was performed by broth microdilution method as described by the Clinical and Laboratory Standards Institute (CLSI) guidelines (<xref ref-type="bibr" rid="B4">4</xref>). The results are shown in <xref ref-type="table" rid="T1">Table 1</xref>. Conventional automated methods such as the VITEK II system (bioMerieux, Hazelwood, MO) were unable to identify this isolate ["SMC-A7077"] to a given <italic>Nocardia</italic> species. Thus, 16S rRNA and <italic>rpoB</italic> gene sequence analyses were performed by using primer sets of 16S-F3 (5'-CAG GCC TAA CAC ATG CAA GT-3')/16S-R3 (3'-GGG CGG WGT GTA CAA GGC-3') and MF (5'-CGA CCA CTT CGG CAA CCG-3')/MR (5'-TCG ATC GGG CAC ATC CGG-3'), respectively (<xref ref-type="bibr" rid="B5">5</xref>). DNA was amplified by polymerase chain reaction (PCR). Purification of the PCR product and sequencing were also performed as previously described. Determined sequences were compared with the public databases EzTaxon (<ext-link ext-link-type="uri" xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="http://www.eztaxon.org">http://www.eztaxon.org</ext-link>) and GenBank (<ext-link ext-link-type="uri" xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="http://www.ncbi.nlm.nih.gov/blast">http://www.ncbi.nlm.nih.gov/blast</ext-link>) using blast searches.</p>

  <p>The 16S rRNA gene sequence (1,248 bp) of the isolate showed the greatest similarity (99.92&#x0025;) to <italic>N. farcinica</italic> ATCC 3318<sup>T</sup> [Gen-Bank no. Z36936], followed by <italic>N. higoensis</italic> IFM 10084<sup>T</sup> (98.80&#x0025;), <italic>N. shimofusensis</italic> IFM 10311<sup>T</sup> (98.72&#x0025;) and <italic>N. asiatica</italic> IFM 0245<sup>T</sup> (98.72&#x0025;). The <italic>rpoB</italic> gene sequence (296 bp) of isolate SMC-A7077 showed complete identity with those of several <italic>N. farcinica</italic> strains such as DSM 43578, IFM 0284 and IFM 10152. However, it showed similarity values of 96.59&#x0025; with <italic>N. shimofusensis</italic> DSM 44733<sup>T</sup>, 95.56&#x0025; with <italic>N. vaccinii</italic> CIP 1775.88<sup>T</sup>, and 95.22&#x0025; with <italic>N. higoensis</italic> DSM 44732<sup>T</sup>. The phylogenetic relationships of isolate SMC-A7077 with other related <italic>Nocardia</italic> strains based on <italic>rpoB</italic> gene sequences are shown in <xref ref-type="fig" rid="F1">Fig. 1</xref>. Based on 16S rRNA and <italic>rpoB</italic> gene sequence analyses, we concluded that the isolate SMC-A7077 was <italic>N. farcinica</italic>.</p>
</sec>

<sec sec-type="discussion">
<title>DISCUSSION</title>
  <p>Species identification among <italic>Nocardia</italic> spp. is important to select appropriate antimicrobial agents because antimicrobial resistance profiles are different among <italic>Nocardia</italic> spp. For the identification of unidentified bacteria or isolates with ambiguous profiles, 16S rRNA gene sequences have been used. Although there are no universal criteria for species identification definition, isolates with sequence identity &#x003E;99&#x0025; are generally considered to belong to the same species (<xref ref-type="bibr" rid="B6">6</xref>). However, 16S rRNA gene is inappropriate for some genera including <italic>Nocardia</italic> due to high similarity. Other more variable housekeeping genes such as <italic>rpoB</italic> and <italic>gyrB</italic> have been suggested for alternate targets of bacterial identification (<xref ref-type="bibr" rid="B5">5</xref>).</p>

  <p>Most CRBSIs emanate from the insertion site and skin is a prominent source of microbes causing bloodstream infection. The microbes that most commonly cause CRBSI associated with percutaneously inserted catheters are coagulase-negative staphylococci, <italic>S. aureus</italic>, <italic>Candida</italic> species, and enteric gram-negative bacilli (<xref ref-type="bibr" rid="B7">7</xref>). While <italic>N. asteroides</italic>, <italic>N. nova</italic> and <italic>N. cavie</italic> have been rarely associated with CRBSI in immunocompromised hosts, CRBSI caused by <italic>N. farcinica</italic> has not been reported (<xref ref-type="bibr" rid="B7">7</xref>-<xref ref-type="bibr" rid="B11">11</xref>). Although brain or intramuscular abscess, pneumonia or osteomyelitis by <italic>N. farcinica</italic> have been reported worldwide including Korea (<xref ref-type="bibr" rid="B12">12</xref>-<xref ref-type="bibr" rid="B16">16</xref>), bacteremic infection due to <italic>N. farcinica</italic> related with catheters has not been reported to our knowledge. In this report, we describe for the first time CRBSI caused by <italic>N. farcinica</italic>.</p>

  <p><italic>N. farcinica</italic> is increasingly recognized as a human pathogen in infections of the lung, brain, skin, wounds and kidney (<xref ref-type="bibr" rid="B12">12</xref>). Resistance to antimicrobial agents occurs more frequently in <italic>N. farcinica</italic> than in other <italic>Nocardia</italic> spp. <italic>N. farcinica</italic> is usually susceptible to TMP-SMX, amikacin, imipenem and ciprofloxacin, but is often resistant to third-generation cephalosporin, ampicillin, erythromycin and gentamicin. TMP-SMX has been selected as the first choice for the treatment in patients with infections by <italic>Nocardia</italic> spp. <italic>N. farcinica</italic> strains resistant to multiple antibiotics including TMP-SMX have been recently reported (<xref ref-type="bibr" rid="B3">3</xref>). Considering the possibility of TMP-SMX resistance, some authors have proposed amikacin in combination with imipenem or amoxicillin-clavulanate as the first-line therapy (<xref ref-type="bibr" rid="B9">9</xref>, <xref ref-type="bibr" rid="B12">12</xref>). Fluoroquinolones have emerged as one of the potentially attractive candidates for the treatment of infections by <italic>N. farcinica</italic> (<xref ref-type="bibr" rid="B17">17</xref>). In some reports, infections caused by multidrug-resistant <italic>N. farcinica</italic> in immunocompromized hosts were successfully treated with linezolid (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B16">16</xref>, <xref ref-type="bibr" rid="B18">18</xref>).</p>

  <p>Identification of clinical isolates using conventional automated methods usually is reported as the genus <italic>Nocardia</italic> ('<italic>Nocardia</italic> species'), rather than to the species level. Given the aforementioned antibiotic resistance concerns posed by <italic>N. farcinica</italic>, it is prudent to suggest that molecular identification or antimicrobial susceptibility test for <italic>Nocardia</italic> species should be performed when '<italic>Nocardia</italic> species' is isolated from a specimen culture to ensure proper treatment. Appropriate duration of antimicrobial treatment in patients with <italic>Nocardia</italic> CRBSI is unclear. Often, antimicrobial therapy is continued for several months after apparent cure because of a concern of high relapse rates of nocardiosis. While it has been suggested that pulmonary or systemic nocardiosis in immunocompromized hosts should be treated for 6-12 months (<xref ref-type="bibr" rid="B12">12</xref>), another report suggested that prolonged antibiotics may not be necessary in nocardial CRBSI without distant metastatic infection after removal of catheter (<xref ref-type="bibr" rid="B8">8</xref>). Presently, the patient was successfully treated with parenteral TMP-SMX for 10 days and a subsequent 6-week course of oral formulation after removal of the CVC.</p>

  <p>Specific recommendations for catheter removal in nocardial CRBSI have not been forthcoming. A report suggested that nocardial bacteremia can be successfully treated without removing vascular catheters (<xref ref-type="bibr" rid="B11">11</xref>), while other case was relapsed after management of keeping CVC (<xref ref-type="bibr" rid="B19">19</xref>). Three cases were treated with removal of CVC (<xref ref-type="bibr" rid="B10">10</xref>, <xref ref-type="bibr" rid="B20">20</xref>). In this report, the patient became afebrile after CVC removal and administration of parenteral TMP-SMX. Removal of the catheter is not absolutely indicated but should be seriously considered prompt removal of catheter when a patient with CRBSI caused by <italic>Nocardia</italic> species does not respond to appropriate antimicrobial agent(s).</p>

  <p>The present novel report of CRBSI caused by <italic>N. farcinica</italic> indicates that <italic>N. farcinica</italic> should be included as a causative microorganism of CRBSI. Molecular identification for <italic>Nocardia</italic> species as well as antimicrobial susceptibility test will be helpful for proper treatment with antimicrobials because antimicrobial susceptibility patterns are variable between <italic>Nocardia</italic> spp.</p>
</sec>

</body>

<back>

<ack>
<title>ACKNOWLEDGMENTS</title>
  <p>We thank Ms. Ji Young Choi (Sungkyunkwan University School of Medicine) for her technical assistance.</p>
</ack>

<fn-group>
<fn fn-type="supported-by">
  <p>This study was supported by a grant from the Korea Health 21 R &#x0026; D Project, Ministry of Health, Welfare &#x0026; Family affairs, Republic of Korea (Grant No. A084063).</p>
</fn>
</fn-group>

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</back>

<floats-wrap>

<fig position="float" id="F1">
<label>Fig. 1</label>
<caption>
  <p>Phylogenetic tree of SMC-A7077 and closely related species of <italic>Nocardia</italic> based on partial rpoB gene sequences. The tree was reconstructed by the neighbor-joining method, and <italic>Mycobacterium tuberculosis</italic> H37Ra was used as an outgroup. Numbers on branching nodes are percentages of 1,000 bootstrap replications. Only values of &#x2265;50&#x0025; are shown. The scale bar represents one substitution per 100 nucleotides.</p>
</caption>
<graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="jkms-25-1665-g001" alt-version="no"></graphic>
</fig>

<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption>
  <p>Results of antimicrobial susceptibility testing for isolate SMC-A7077</p>
</caption>
<graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="jkms-25-1665-i001" alt-version="no"></graphic>
<table-wrap-foot>
<fn>
  <p><sup>&#x002A;</sup>S, susceptible; R, resistant.</p>
  <p>NA, not available.</p>
</fn>
</table-wrap-foot>
</table-wrap>

</floats-wrap>

</article>